ROI-pair importance for autism classification.
Gradient-based analysis on Cortex reveals which connectivity edges drive ASD predictions. Each ROI-pair ranked by mean gradient magnitude across your cohort, with directionality (ASD↑ = stronger in autism, ASD↓ = weaker).
Upload connectivity data
CSV, Excel, or .npz with per-subject connectivity rows (4,950 cols). Cortex computes the gradient of its ASD-logit w.r.t. each connectivity feature, averaged across your cohort. Top-25 edges returned, mapped to Schaefer 7-network labels.
(N, 4950) — N subjects, pre-extracted features(100, 100) — single subject connectivity matrix(T, 100) — single subject ROI time series (T ≥ 30) — we compute connectivity for youNetwork-level importance
| # | ROI pair | Importance | Direction |
|---|---|---|---|
| 1 | L_DMN_45↔R_DMN_95 DMN | 0.92 | ASD↑ |
| 2 | L_Limbic_28↔R_Limbic_78 Limbic | 0.87 | ASD↓ |
| 3 | L_DMN_42↔R_DMN_92 DMN | 0.84 | ASD↑ |
| 4 | L_DMN_48↔L_Vis_5 DMNVis | 0.78 | ASD↓ |
| 5 | L_Limbic_28↔L_DAN_20 LimbicDAN | 0.76 | ASD↑ |
| 6 | L_VAN_25↔R_VAN_75 VAN | 0.73 | ASD↓ |
| 7 | L_Vis_0↔L_Vis_3 Vis | 0.69 | ASD↑ |
| 8 | L_SomMot_10↔R_SomMot_60 SomMot | 0.66 | ASD↓ |
| 9 | L_Control_30↔R_Control_80 Control | 0.63 | ASD↓ |
| 10 | L_Limbic_28↔R_Limbic_78 Limbic | 0.60 | ASD↑ |
| 11 | L_DMN_42↔L_Limbic_28 DMNLimbic | 0.58 | ASD↓ |
| 12 | L_SomMot_8↔L_SomMot_12 SomMot | 0.54 | ASD↑ |
| 13 | R_VAN_72↔R_Vis_55 VANVis | 0.51 | ASD↓ |
| 14 | L_DAN_20↔R_DAN_70 DAN | 0.48 | ASD↓ |
| 15 | L_Limbic_28↔L_DMN_45 LimbicDMN | 0.45 | ASD↑ |
Biomarker detail
↔
R_DMN_95
What does this mean?
In plain English
Cortex learned to tell autism-like and typical-like connectivity apart. To understand what it learned, we ask Cortex: "For each connection between brain regions, how much did this connection matter in your decision?" The answer is an importance score per ROI-pair. Higher score = Cortex paid more attention to that connection.
Of the 15 top ROI-pairs, 7 show stronger connectivity in autism (hyperconnectivity) and 8 show weaker connectivity (hypoconnectivity).
Top network: DMN
DMN contributes the most importance across all top ROI-pairs. Default Mode Network — active when you're at rest, self-reflecting, or mind-wandering. Central to self-referential thinking.
This is consistent with a large body of autism neuroimaging literature, which has repeatedly identified atypical connectivity in DMN, social-attention networks (VAN), and frontoparietal control systems.
Your top biomarker edge
L_DMN_45 ↔ R_DMN_95 is Cortex's most important single connection (importance = 0.92).
It involves the DMN network. Cortex expects this connection to be stronger in autistic brains than typical — a finding consistent with reported DMN hyperconnectivity patterns.
What to do with these results
Treat these as targets for follow-up, not discoveries. Good next steps:
(1) Cross-check literature — do the top edges match published autism connectivity findings? If yes, you've corroborated your dataset and Cortex's learning. (2) Targeted testing — design a focused imaging study on the top 3-5 edges with a larger, stratified cohort. (3) Mechanism — what could cause this specific edge to differ? Tract-tracing, neurotransmitter mapping, genetics can answer that downstream.
Important caveats
Gradient-based importance tells you what Cortex used to classify, not necessarily what causes autism. A feature can be highly predictive because it's an artifact (motion, age, sex confound) rather than a biological signal. Always check your results against known confounds, and prefer edges that appear robustly across multiple cohorts.
Interpretation notes
Gradient-based importance: measures how much each input feature contributes to Cortex's classification. Averaged across your uploaded cohort, this yields stable ROI-pair rankings.
Direction (ASD↑/↓) is the sign of the mean gradient w.r.t. the ASD class. ASD↑ means Cortex expects stronger connectivity in autism; ASD↓ means weaker.
These are hypotheses, not facts. Cortex's biomarkers are candidates for follow-up in targeted imaging studies. Results consistent with published literature on DMN hyperconnectivity, fronto-parietal hypoconnectivity, and social-network weakening in ASD validate the approach, but your specific cohort may differ.
ROI naming uses Schaefer 100-parcel 7-network ordering. First 50 indices = left hemisphere, next 50 = right. Networks: Vis, SomMot, DAN, VAN, Limbic, Control, DMN.